CDS

Accession Number TCMCG007C10977
gbkey CDS
Protein Id XP_009125877.1
Location join(2222526..2222643,2222720..2222932,2223090..2223127,2223277..2223484,2223640..2223807,2223915..2224060,2224287..2224387,2224543..2224651,2224980..2225157,2225268..2225497,2225584..2225760,2225897..2225968,2226055..2226231,2226399..2226460,2226548..2226700,2226785..2228381)
Gene LOC103850838
GeneID 103850838
Organism Brassica rapa

Protein

Length 1248aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009127629.2
Definition pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category A
Description Pre-mRNA-splicing factor ATP-dependent RNA helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12815        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0003002        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009814        [VIEW IN EMBL-EBI]
GO:0009817        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010015        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010051        [VIEW IN EMBL-EBI]
GO:0010053        [VIEW IN EMBL-EBI]
GO:0010054        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016246        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031053        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031124        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033120        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035195        [VIEW IN EMBL-EBI]
GO:0035196        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048469        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048588        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048764        [VIEW IN EMBL-EBI]
GO:0048765        [VIEW IN EMBL-EBI]
GO:0048767        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071695        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080147        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090627        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAGGTTGATCCATTCAAAGCTGCGGAGACGTCGGAAACGGAGAAGGAAACCGGCGGCGATCTTCCGGTGAAGGAGAAACTGACTTTCACAGCTCCGGAGAGGAAGTCCCGTCTAGGTTTAGATGTGAGGGCAATGGAGAAAAGGGAGAGTGCAAAGTCTCAGGGGGAGTTTAAGGTCCCCAGGAAGCCTGCAGTATCTGTTTCAGCGTCTATGGATGAAGATGATAGATCTGGAGTATCGGGAATTGATGATGGAGGAGATAACAGTCGGCCTGACCATTCCAGCAGAAGGTATAGAGATAAATCTTCAAGATCTGAGACTCCACAAGAAAGTACTGTGACTACAGAGAAAGCTGCAGCTTCAGCTACTCCTAGGACATCTAGATACGAGAGAGATGATAGCAGTAGAAACCGAAACGAATATAGGTATGACAGAAGTGAAACTCCGCGGTCAAGGCAGAGAAGCACATACGATGAGATGGATCGCTACCGAGGGAGGGAGTCCTATCGCGAATCACCCCGAGATTATCACGGAGAAAAGCGCGGAAGATACAGTGTTGATAGGAGAACTCCAGGTAGGTCAGACTGGGATGATGGAAGATGGGAATGGGAAGATAGTCCACGCGGGGATAGAGACTCTACTTACAACAAACGGCATCAGCCTTCTCCATCACCCATGTTAGGTGCAGCTTCACCAGATGCTCGTTTAGCCTCCCCTTGGCTGGATACACCACGCTCAACAATGGCTTCTGCTTCTCCATGGGATATTGGTGCACCTTCTCCTGTCCCAATCCGGGCTTCTGGGTCCTCTGTCAGATCCTCAGGCTCAAGGTATGGTGGAAGATCCAATCAACGTGCAGACTCTAGGGAAGGTGATCTGACCAAGGAGGGGCATCCAGATGAGGATAGATCGGAAGGAGCTGAAGAATTTAACCATGAGATCACAGACACAATGCGTCGGGAAATGGAATATCACTCGGATCTTGCATGGTATGATACGGACGAAGGGAACTCACTGTTTGATGCTGATAGTGCATCCTTTTTTCTTGGAGATGACGCTTCTGTGCAGAAAAAGGAAGCTGAGCTGGCAAAAAGACTGGTTAGAAGGGACGGTAGCAAAATGTCACTCGCTCAGAGTAAAAAATACTCTCAGCTTAACGCTGATAACGCCCAGTGGGAAGACCGTCAGCTTCTCAGATCTGGAGCTGTTAGAGGCACAGAAGTGCAGACCGAGTTTGATAGCGAGGAAGAACGGAAAGCAATTCTTCTTGTGCATGATACAAAGCCGCCTTTCCTTGATGGAAGAATCGTTTTCACAAAGCAAGCAGAGCCAGTGATGCCTATAAAGGATCCCACATCAGACATGGCTATAATTTCGCGAAAAGGATCAGGTCTTGTGAGAGAAATTCGGGAGAAACAAAGTATGCATAAATCGCGACAGCGATTTTGGGAGCTTGCAGGTTCTAACCTTGGTAATATCCTTGGTGTTGAAAAAACAGCTGAGCAGATTGATGCCGATACTGCTGAAGTTGGTGACGAAGGTGAAGTAGACTTTAAGAACGAAGCTAAATTTGCACAGCATATGAAGAAGGGAGAAGCTGTGAGTGAATTCGCCATGTCAAAGACCATGGCACAGCAACGACAGTATCTTCCCATATTTTCTGTTAGAGATGATTTATTACAGGTAATAAGAGAAAACCAGGTGATAGTGGTGGTTGGAGAAACTGGTTCCGGAAAGACTACTCAGCTCACACAGTATCTTCACGAGGACGGGTACACTGTAAACGGTATAGTAGGTTGCACCCAACCAAGACGTGTAGCAGCTATGAGTGTTGCAAAGAGAGTTAGTGAAGAGATGGAAACAGAGTTGGGCGATAAAGTGGGGTATGCAATTCGTTTTGAAGATGTAACTGGTCCAAATACTGTTATCAAGTACATGACGGATGGAGTGCTACTGAGAGAGACACTTAAAGATTCCGACCTGGATAAGTATCGTGTGGTAGTGATGGATGAAGCGCATGAAAGGTCACTCAACACGGACGTCCTTTTCGGAATACTGAAAAAAGTTGTTGCTCGGCGTCGTGATTTCAAACTGATAGTCACTTCAGCGACCCTTAATGCTCAAAAGTTTTCCGATTTCTTCGGGAGTGTTCCTATATTCAACATTCCTGGAAGGACCTTCCCTGTCAATATTCTCTACTCTAAAAGTCCTTGTGAAGACTATGTTGAAGCCGCTGTTAAACAGGCAATGACGATTCACATAACGAGCCCACCTGGGGACATTCTCATATTTATGACCGGGCAAGATGAGATTGAAGCGGCGTGCTTTTCTCTTAAGGAGAGAATGGAACAGCTGATTGCATCATCCAAGAGAGACGTCACGAACCTACTGATTCTCCCTATATACTCTCAGTTACCTGCTGACTTGCAAGCAAAAATATTCCAGAAACCAGAAGATGGAGCACGTAAATGCATTGTTGCCACCAATATTGCTGAAACATCATTGACAGTCGATGGAATATACTATGTGATTGACACGGGGTATGGAAAGATGAAGGTTTTCAATCCTAGAATGGGTATGGATGCTCTCCAGGTTTTCCCAATTAGTCGTGCTGCCTCTGATCAGCGTGCAGGAAGAGCTGGAAGGACAGGGCCGGGAACATGTTACAGGCTGTATACAGAGAGTGCATATCTAAACGAGATGTTGCCGAGTCCCGTGCCAGAGATTCAGCGAACAAATCTGGGTAACGTTGTGTTGTTGTTGAAGTCGCTGAAAATAGACAACTTGCTAGAGTTTGATTTCATGGACCCACCTCCACAAGAGAACATCCTCAACTCTATGTACCAGCTTTGGGTGTTGGGCGCTCTCAGCAATGTCGGAGGATTAACTGATCTCGGGTGGAAGATGGTGGAGTTCCCGTTGGACCCACCTCTTGCGAAGATGCTCTTAATGGGTGAACGGCTCGACTGCATAGACGAGGTCTTGACGATCGTGTCGATGCTTTCAGTACCTTCAGTGTTCTTCAGACCGAAAGAGAGAGCAGAAGAGAGCGACGCCGCGAGGGAGAAGTTTTTCGTGCCGGAGTCTGATCATCTGACGCTACTGAACGTGTATAAGCAATGGAAAGAGCATGACTACAGAGGAGACTGGTGCAATGACCATTACCTGCAAGTCAAAGGTCTGAGGAAAGCTAGAGAAGTAAGATCCCAGCTTCTGGATATCCTCAAGCAACTCAAGATACCGCTCAAGTCGTGTGGGCCGGATTGGGATATCGTGAGAAAAGCCATATGCTCAGCGTATTTCCACAACTCAGCTAGACTAAAGGGTGTTGGTGAGTACGTGAACTGTAGAACCGGGATGCCTTGCCATTTGCACCCGAGCAGTGCACTGTATGGCCTGGGATACACTCCTGATTACGTGGTGTATCACGAACTGATCTTAACCACGAAGGAGTATATGCAGTGCGCTACATCTGTTGAGCCGCATTGGCTGGCTGAGTTGGGACCTATGTTTTTCTCGGTCAAGGACTCGGATACATCGATGCTGGAGCACAAAAAGAAGCAGAAGGAAGAGAAAACAGCGATGGAGGAAGAGATGGAGAAGCTGAGAAGAGATCAGGCGGAGGCGGAGGTGAGAAGCAAAGAGAGAGAGAAGAGGAAAAGGGCAAAGCAGCAGCAACAGGTTTCTGGTCCTGGCATGAAGAAAGGCACCACTTACCTCAGGCCTAAGAAGTTTGGTCTCTAA
Protein:  
MQVDPFKAAETSETEKETGGDLPVKEKLTFTAPERKSRLGLDVRAMEKRESAKSQGEFKVPRKPAVSVSASMDEDDRSGVSGIDDGGDNSRPDHSSRRYRDKSSRSETPQESTVTTEKAAASATPRTSRYERDDSSRNRNEYRYDRSETPRSRQRSTYDEMDRYRGRESYRESPRDYHGEKRGRYSVDRRTPGRSDWDDGRWEWEDSPRGDRDSTYNKRHQPSPSPMLGAASPDARLASPWLDTPRSTMASASPWDIGAPSPVPIRASGSSVRSSGSRYGGRSNQRADSREGDLTKEGHPDEDRSEGAEEFNHEITDTMRREMEYHSDLAWYDTDEGNSLFDADSASFFLGDDASVQKKEAELAKRLVRRDGSKMSLAQSKKYSQLNADNAQWEDRQLLRSGAVRGTEVQTEFDSEEERKAILLVHDTKPPFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSGLVREIREKQSMHKSRQRFWELAGSNLGNILGVEKTAEQIDADTAEVGDEGEVDFKNEAKFAQHMKKGEAVSEFAMSKTMAQQRQYLPIFSVRDDLLQVIRENQVIVVVGETGSGKTTQLTQYLHEDGYTVNGIVGCTQPRRVAAMSVAKRVSEEMETELGDKVGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVVVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSDFFGSVPIFNIPGRTFPVNILYSKSPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERMEQLIASSKRDVTNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYVIDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLEFDFMDPPPQENILNSMYQLWVLGALSNVGGLTDLGWKMVEFPLDPPLAKMLLMGERLDCIDEVLTIVSMLSVPSVFFRPKERAEESDAAREKFFVPESDHLTLLNVYKQWKEHDYRGDWCNDHYLQVKGLRKAREVRSQLLDILKQLKIPLKSCGPDWDIVRKAICSAYFHNSARLKGVGEYVNCRTGMPCHLHPSSALYGLGYTPDYVVYHELILTTKEYMQCATSVEPHWLAELGPMFFSVKDSDTSMLEHKKKQKEEKTAMEEEMEKLRRDQAEAEVRSKEREKRKRAKQQQQVSGPGMKKGTTYLRPKKFGL